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SPRUCE-ing Up Science
… And, it’s an opportunity to contribute to the rapidly expanding field of bioinformatics. When Lawrence embarked on … As a part of his internship, he was regularly tasked by his mentor to present his project work and navigate a … your point across as quickly as possible,” he said. After years of practice presenting his science and learning what …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… to single hosts, and instead of lysing them, which appears to be prevalent in marine environments, they were … This work,  recently published in  The ISME Journal , by contrast, relied on methods that eschew culturing, … single-cell and metagenomic sequencing. A team co-led by Mária Džunková, postdoctoral researcher at the U.S. …
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Complete genome sequence of the plant-associated Serratia plymuthica strain AS13
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Webinar: SIP technologies at EMSL and JGI
… (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and nutrient flux, and … Like others, our turnaround time has been impacted by the pandemic. 3. Q: What instrument / method does the JGI … out through the roots, into the soil, and then picked up by the rhizosphere, then that takes a little bit longer.  A …
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Learning to Look
… July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint … sequence is most likely not an inovirus. But if these nearby genes are both short and novel, then that’s a very good … phyla across virtually every ecosystem.” By significantly expanding the known diversity of these viruses, genomic …
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Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9
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Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
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Stimulation of dissimilatory sulfate reduction in response to sulfate in microcosm incubations from two contrasting temperate peatlands near Ithaca, NY, USA.
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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Picking Up Threads of Cotton Genomics
… the simplest cotton genome ( G. raimondii ) several years ago. Studying the cotton genomes provides breeders with … field, growers can easily distinguish the cotton species by traits such as flower color, plant height, or fiber … over a million years ago, their genomes were “remarkably” stable. “We thought we were sequencing the same genome …
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Axel Visel
… LA, Visel A (2013). Fine tuning of craniofacial morphology by distant-acting enhancers. Science 342, 1241006. Visel A …
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Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1T, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
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