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Ten Years of Maintaining and Expanding a Microbial Genome and Metagenome Analysis System
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An HMM approach expands the landscape of sesquiterpene cyclases across the kingdom Fungi
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An expanded evaluation of protein function prediction methods shows an improvement in accuracy
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … a neural network approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Jane Grimwood Named HudsonAlpha Genomics Chair
Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … and the JGI. Building off this work, researchers at three DOE Bioenergy Research Centers (BRCs) have expanded the network of common gardens and are exploring …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data …
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota lineages
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Allopolyploidy expanded gene content but not pangenomic variation in the hexaploid oilseed Camelina sativa
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