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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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Association mapping, transcriptomics, and transient expression identify candidate genes mediating plant–pathogen interactions in a tree
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … cellulose and hemicellulose is well-established: Across all life forms and with little exception, organisms have figured … to slowly break down lignin (think of a fallen, decomposing tree in the forest). Because oxygen is essential to how …
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What Happens Underground Influences Global Nutrient Cycles
… Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming through the …
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Separation of life stages within anaerobic fungi (Neocallimastigomycota) highlights differences in global transcription and metabolism
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea … get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … This means they hold clues for understanding how life thrives in extreme environments. They also produce a …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … of this giant filamentous bacterium, along with its life cycle. For most bacteria, their DNA floats freely … in coastal sediments,” said Woyke, who also heads the JGI’s Microbial Program and is one of the article’s senior …
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A second special issue of Standards In Genomic Sciences from the Genomic Standards Consortium
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Development of a Freeze-Dried CRISPR-Cas12 Sensor for Detecting Wolbachia in the Secondary Science Classroom
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth and Sports of the Czech Republic …
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Russulaceae: a new genomic dataset to study ecosystem function and evolutionary diversification of ectomycorrhizal fungi with their tree associates
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Metagenomic reconstruction of nitrogen and carbon cycling pathways in forest soil: Influence of different hardwood tree species
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