Results

Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… all of this information. The JGI aims to create pipelines, tools and other standardized data resources that the global … meet the needs of scientists out in the field, and developing such tools has been a collaborative effort. For … and software developers at the JGI and Berkeley Lab were developing specific programs to handle this scale of data. …
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Rearrangement of a Large Novel Pseudomonas aeruginosa Gene Island in Strains Isolated from a Patient Developing Ventilator-Associated Pneumonia
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Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)
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RNA-Seq-based high-resolution linkage map reveals the genetic architecture of fruiting body development in shiitake mushroom, Lentinula edodes
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Development of PCR-based markers for the identification and detection of Lophodermella needle cast pathogens on Pinus contorta var. latifolia and P. flexilis
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Diversity of genomic adaptations to the post‐fire environment in Pezizales fungi points to crosstalk between charcoal tolerance and sexual development
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… such as individual genes, whole pathways, genome-editing tools, and reporters.” JGI-developed genetic engineering … engineered root bacteria  Pseudomonas  and Ralstonia with enzymes that make phosphate bioavailable for plants. When … A final recent advance in CRAGE is the addition of CRISPR enzyme Cas9. Originally, CRAGE was only used to  insert …
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SNP Assay Development for Linkage Map Construction, Anchoring Whole-Genome Sequence, and Other Genetic and Genomic Applications in Common Bean
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Expression quantitative trait loci mapping identified PtrXB38 as a key hub gene in adventitious root development in Populus
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How Maize Makes An Antibiotic Cocktail
… protects it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays ) produces a plethora … pathways, entailing the function of more than a dozen enzymes. But researchers have now revealed that just a handful of enzymes are needed to transform zealexins and related …
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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Integrating Experimentation with Data
… access to cutting-edge capabilities for omics-based and analytical characterization, imaging, and visualization, … systems using advanced experimental and informatic tools at no cost. The JGI and EMSL are supported by the …
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