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Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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50-year fire legacy regulates soil microbial carbon and nutrient cycling responses to new fire
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose … Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved understanding of multiple forest systems, … an investment portfolio. If a stress like wildfire or drought threatens some fungal species, other fungi will fill …
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Cultivating Symbiotic Antarctic Microbes
… of soil-sediment environments, water and air-atmosphere with the humans and the biosphere), including the global … genome sizes and their cells were not observed to associate with host cells. In the  Proceedings of the National Academy … Rick Cavicchioli at the University of New South Wales along with researchers at the U.S. Department of Energy (DOE) …
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Access to Rock Star Scientists
… their work. It’s fun to be around people who are generous with their time and like nerding out about the big stuff, … patience of my JGI PIs, having lots of data to play around with.” …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria … bacteria instead go through a boom and bust cycle aligned with light availability. A long-running time-series study … most months each year, Ace Lake is covered in thick ice, with a combination of marine and freshwater below. This …
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Scaling Up Existing Skill Sets
… Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship … Comparative Analysis What effect has your summer internship with the JGI had on your plans to pursue a STEM career?
 … Functional Genomics What effect has your summer internship with the JGI had on your plans to pursue a STEM career? I …
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2022 Progress Report
… of the JGI is to provide the global research community with access to the most advanced integrative genome science …
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Webinar: PhycoCosm Tutorial
… not sequenced by JGI, if PIs are interested are working with us please contact me at [email protected] 5.  Q: If … is based on a model that is not based on a genome model with PhycoCosm, how do we go about getting it in your … on the gene model, that should be ok generally. We can work with you to re-map the data. If your rna-seq data doesn’t …
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Webinar: SIP technologies at EMSL and JGI
… EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, … so you’d need at least 2 micrograms in the sample to start with. 2. Q: What would a typical turnaround time be for data … the isotopomers. We estimate the overall atom enrichment within the bulk community DNA, and that gives us a rough …
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A User-Centered Approach to Accessing JGI Data
… Users were previously limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( … are currently limited to: Public data: datasets associated with completed projects that are eligible for public … + annotations) For IMG & Mycocosm: Data that is associated with an ITS project ID (AP or SP) Q: What JGI Data Policy …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa … metric tons . The global chocolate brands couldn’t exist without cocoa.  But today the plant is under threat due to … of the world’s largest buyers of cocoa, is collaborating with others to develop healthier and more productive cacao …
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