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High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis
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Alabama Agricultural & Mechanical University Internship Program
Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in Berkeley, California honing their scientific skills and collaborating with their mentors and fellow interns. Inspired by the success of the UC Merced internship program, they left the JGI …
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Microbial drivers of methane emissions from unrestored industrial salt ponds
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… relevant to living on a changing planet. Transcript for Audio   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: … changing planet. In this short audio production, we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the …
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Towards optimized viral metagenomes for double-stranded and single-stranded DNA viruses from challenging soils
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Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… back story — they rely on enzymes that have been evolving for billions of years. However, these enzymes are often … as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … organisms have developed metabolisms that function with a toolkit of enzymes. It’s useful to differentiate these …
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Eelgrass Proves to Be Much Younger Than We Thought
… most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, scientists have shed … However, eelgrass didn’t have a reliable calibration tool in the form of another species, so the scientists had to use the genome itself.   Approximately 67 million years ago, the …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant … viruses (NCLDV) supergroup. The expansion of the diversity for large and giant viruses offered the researchers insights …
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JGI@25: Roots of a Mutualist Relationship
… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal … genome sequence of a mycorrhizal fungus shifted the focus from looking at single organisms to applying a broader …
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Transcription Factor Family-Based Reconstruction of Singleton Regulons and Study of the Crp/Fnr, ArsR, and GntR Families in Desulfovibrionales Genomes
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RegPrecise web services interface: programmatic access to the transcriptional regulatory interactions in bacteria reconstructed by comparative genomics
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