Results

Identification of candidate genes in Arabidopsis and Populus cell wall biosynthesis using text-mining, co-expression network analysis and comparative genomics
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A One-Stop Shop for Analyzing Algal Genomes
… sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative …
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Microorganisms Involved in Methylmercury Demethylation and Mercury Reduction are Widely Distributed and Active in the Bathypelagic Deep Ocean Waters
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A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants
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Cynipid wasps systematically reprogram host metabolism and restructure cell walls in developing galls
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Regulation of hair cell and stomatal size by a hair cell-specific peroxidase in the grass Brachypodium distachyo n
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and … and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and … has changed our understanding of the microbiome and the microbial sciences field. Roux will be recognized at the …
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A Plant Root Atlas for Tracking Developmental Trajectories
… patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously … developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be available for …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Synthesis
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. … transformations.” The JGI’s large-scale call included algal genomics as a focus area, and one of the accepted proposals … the gene functional networks and regulatory networks of a single strain of  Sinorhizobium meliloti .  S. meliloti is …
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Giant Virus Infection Signatures Are Modulated by Euphotic Zone Depth Strata and Iron Regimes of the Subantarctic Southern Ocean
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