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Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov.
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The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible
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Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality
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Uncovering novel functions of the enigmatic, abundant, and active Anaerolineae in a salt marsh ecosystem.
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Functional plasticity of HCO3 – uptake and CO2 fixation in Cupriavidus necator H16
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Structural characterization of a soil viral auxiliary metabolic gene product – a functional chitosanase
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Validating genome-wide CRISPR-Cas9 function improves screening in the oleaginous yeast Yarrowia lipolytica
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Natural Prodcast Episode 20: Brian Bachmann
… went on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining … And then we used those to find gene clusters in cosmid libraries and sequence those by shotgun. We had a dozen … ATP synthase.” On everninomicin biosynthesis: “EvdS6 is a bifunctional decarboxylase from the everninomicin gene …
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Data Ecosystem
… such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to enable …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational … the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After … group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). …
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Patterns in Wetland Microbial Community Composition and Functional Gene Repertoire Associated with Methane Emissions
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Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics
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