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Simon Roux
… knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux … and evolutionary drivers of virus-host dynamics in soil microbial communities. … et al., 2020. Giant virus diversity and host interactions through global metagenomics. Nature 578, 432–436. …
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Open Frameworks Training the Next Generation of Scientists
… has invested in training the next generation workforce through funding opportunities managed by the Office of … fungal biology and genomics. Fungi can be better understood through reference genomes, but unfortunately there are not … agriculture, ecosystem health, and medicine optimization.  Through the Myco-Ed public workforce educational training …
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
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Metapangenomics reveals depth-dependent shifts in metabolic potential for the ubiquitous marine bacterial SAR324 lineage
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Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages
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Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium.
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Special Initiatives & Programs
… support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity Announcements ,  Science … funding call, proposals are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and … BERSS). Available Resources All JGI products are available through BERSS. Learn more about our  offerings, capabilities …
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JGI@25: Building a Better Bean
… economies. It also plays an important role in soil health through nitrogen-fixation and holds clues for maximizing … to darken. Called “after-darkening,” this process not only means the beans take longer to cook, but it also depletes …
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DOE Metrics
… Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. … computational method for improving the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] …
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Fishing for Novel Cellulose Degraders
… characteristics. When they tested the screen method on a microbial community from geothermal hot springs, they … microbes. The new technique is another tool for microbial ecologists to learn more about the diversity of … served as the “bait,” and then they isolated the particles through the “hook” of fluorescence-activated cell sorting to …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… noted study senior author  Tanja Woyke , who heads JGI’s  Microbial Program . The team mined more than 8,500 publicly … including data from several DOE-mission relevant proposals through JGI’s  Community Science Program . Proposals from … “Klosneuviruses.” Previously known members of the viral lineages in the NCLDV group infect mainly protists and …
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Analysis of the genetic diversity of the soybean rust pathogen Phakopsora pachyrhizi reveals two major evolutionary lineages
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