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Updated Virophage Taxonomy and Distinction from Polinton-like Viruses
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Beneath the surface: Unsolved questions in soil virus ecology
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Meeting report: International soil virus conference 2024
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VirJenDB: a FAIR (meta)data and bioinformatics platform for all viruses
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High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
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Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism
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Pinning Down a Piece of Photosynthesis
… and cyanobacteria create the air we breathe and the fuel for food webs as they turn carbon dioxide and water into … or DRI for short.  A kaleidoscope of structure-function data To study DRI experimentally, Blaby-Haas, Grosjean and … used the JGI-developed  guideRNA and Sequence Extraction Tool (gRNA-SeqRET) to produce knock-out mutants for …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Australia but is increasingly farmed in other countries for essential oil production. The recent assembly of two … from a biofuels production perspective. By using genomic database alignment tools, researchers searched for TPS genes in C. citriodora . … was supported by FAPDF grant “Nextree” 193.000.570/2009. For the portion of the work conducted by the Joint Genome …
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ProDeGe: a computational protocol for fully automated decontamination of genomes
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BOTany methods: accessible automation for plant synthetic biology
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Improving the Cacao Genome and Phytozome
… infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest … by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the … Wrigley. The annotated genome has been updated to a high quality modern standard and includes RNA-seq data. The …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect … By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able …
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