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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) to develop a process for more … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is … can carry out. The work on single cells was done in collaboration with scientists Tanja Woyke and Rex Malmstrom at … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), through the JGI …
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An Automated Tool for Assessing Virus Data Quality
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), has developed a command-line tool … step, numerous genes for antibiotic resistance and secondary metabolism would have been incorrectly attributed … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… to protect themselves from environmental stresses, ferns’ secondary metabolites and associated genes are great … or C-fern, specifically has been studied in plant research laboratories and plant biology courses across the globe for … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) took on the Open …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth … Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is located in one of those counties. The … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Jessie Uehling of the University of California, Berkeley is interested in better characterizing the role … intercropping efforts appear to be redistributing water availability. By sequencing the millet rhizosphere and …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and Aix Marseille University … This work was conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI … me to a new career path of being a researcher in a national laboratory. In the future, I plan to pursue this path and … to pursue a STEM career? Returning as a JGI intern for a second time since participating in summer 2017 ( read more …
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Introducing New Members of the JGI User Executive Committee
… – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here … la Recherche Scientifique (CNRS) in October and maintains a lab at Michigan State University. She aims to help overcome … in reaching and engaging with new international collaborators and other scientific organizations. Fungal …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and … diverse environments. The Science Cyclic di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria … approach, researchers at the University of California, Berkeley and the Joint Genome Institute, a DOE Office of …
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Complete genome sequence of Deinococcus maricopensis type strain (LB-34T)
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