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Viral dynamics in a high-rate algal pond reveals a burst of Phycodnaviridae diversity correlated with episodic algal mortality
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Learning to Look
… learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to … systematically manage to miss them; maybe it’s due to the way we currently isolate and extract viruses,” said the … “self-targeting” inoviruses suggested they had found a way to deactivate the CRISPR-Cas systems, and led the …
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Decoding Yellowstone’s Microbial Mats
… over two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered surprises, adopted new …
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Methane Makers in Yosemite’s Lakes
… sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. These lakes are isolated, but varied. They’re a great way to see how climate change affects freshwater ecosystems, and …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… To engineer yeast to do more, and understand genomes in general, Jef Boeke, … Health) and Leslie Mitchell (Neochromosome) have worked to replace yeast’s native chromosomes with synthetic … collaboration, with some artistic endeavors along the way. Eventually, the goal is to create an entirely …
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Genome-sequenced bacterial collection from sorghum epicuticular wax
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 … form it emerged and how it gave rise to the different pathways we see today is not only important to understand early … Archaea and Eukarya.   One genome, two metabolic pathways “Up to this point, most phylogenomic trees have relied …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … of other organisms. As they infect microbes like bacteria, algae and protists, all kinds of viruses impact many … broader range of viral genomes would give researchers more ways to engineer microbial genes. Eventually, whether the …
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Environmentally responsive QTL controlling surface wax load in switchgrass
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Game On: High School Students Drive Everglades Metagenomics Study
… Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to help train the next generation of scientists. She shares … genes involved in environmentally significant metabolic pathways related to methane production, nitrogen fixation, and …
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A More Intuitive Phytozome Interface
… plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become the … version 13 and, in fact, all versions of Phytozome), can always be access in one of two ways: From the BioMart Genome Archive data warehouse.  Got …
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JGI@25: Strengthening Soybean
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … multiple projects involving rust pathogens. “All along the way, it was just like rediscovering genetics, with the … that what we bring to the grower is novel … We’re a long way there; we are developing traits with key partners, both …
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