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Trent Northen
… Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had leadership roles within large DOE-funded research … programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to …
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Hiroshi Otani
… joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His research activity is focused on developing and implementing new technologies and … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, …
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Tina Clarke
… Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in … (JGI). Tina serves in an HR advisory role to Division/Area management and supervisors to recommend solutions … Lawrence Berkeley National Laboratory, Berkeley, CA/ Sr. Compensation Analyst and …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … what escapes to the atmosphere in the form of greenhouse gases (e.g., carbon dioxide, methane, and nitrous oxide). … enzymes in the soil and who made them. Based on data reported in the April issue of Soil Biology and Biochemistry …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have wondered, how … environments? Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four subgroups, adapted …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … Laccaria bicolor on MycoCosm … Laccaria bicolor has a symbiotic relationship with poplar …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … through the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited speakers shared how research infrastructure – DNA sequencing, synthesis, metabolomics, data … authority on viruses, Holmes was part of  the initial release the genome sequence for SARS-CoV-2 , back in January …
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Triggering Morel Fruiting
… in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor … Institute (JGI), a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when … culturally, and ecologically important fungi, widely prized as a culinary delicacy, but also because they influence …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed … group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). …
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Simon Roux
… Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new … Pascal, France Ph.D. in Bioinformatics, Ecology and Evolutionary Biology, Université Blaise Pascal, France …
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Frederik Schulz
… the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics … LDRD-funded project, Dr. Schulz established a single-cell-based discovery pipeline and enrichment metagenomics for …
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