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Homologous Recombination and Transposon Propagation Shape the Population Structure of an Organism from the Deep Subsurface with Minimal Metabolism
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Fungal Friends or Foes in Plant Roots
… fungi can form such symbiotic partnerships. To learn more about these other plant-fungal relationships, an … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that …
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Fungus Fuels Tree Growth
… a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can … were striking. Adding PM193 caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . … of Science User Facility, through its  Community Science Program in order to get  M. elongata and  I. europaea  …
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Fishing for Novel Cellulose Degraders
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and unknown. The challenge remains to learn more about what microbes are present in any given … the function-driven, single-cell screen can uncover more about cellulose-degrading microbes. The new technique is …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive … genome sequencing, or only “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and the microbial world but … are known, we also have the capability to set up “super-portals” to organize the two haplotypes in a central …
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Comparative genomic and physiological analysis provides insights into the role of Acidobacteria in organic carbon utilization in Arctic tundra soils
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Substrate-restricted methanogenesis and limited volatile organic compound degradation in highly diverse and heterogeneous municipal landfill microbial communities
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Northern peatland microbial communities exhibit resistance to warming and acquire electron acceptors from soil organic matter
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Building Sphagnum Genomic Resources
…   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of … resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel … decomposed matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive … trees are incorrect or need to be changed, please contact us and we’ll work work it out 2.  Q(uestion): Do you publish … is not based on a genome model with PhycoCosm, how do we go about getting it in your system? A: I think the best way is …
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Scaling Up Existing Skill Sets
… experience working intermediately between academia and industry, which is something I didn’t even know existed before. … my Ph.D. What is/has been one of your favorite things about your JGI internship?  Doing the JGI internship has … from private industry. I really liked the fairly flat organizational structure, and found everyone to be welcoming …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find a … prediction approaches, researchers have created a new program called iPHoP (pronounced “eye-pop”,  freely …
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