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Evolution of a Fungal Gene Expression Regulator
… the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may … the need for a more comprehensive exploration of genomic DNA modifications (epigenome).  In  Nature Ecology & … methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference genomes and …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive … trees are incorrect or need to be changed, please contact us and we’ll work work it out 2.  Q(uestion): Do you publish … is not based on a genome model with PhycoCosm, how do we go about getting it in your system? A: I think the best way is …
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Substrate-restricted methanogenesis and limited volatile organic compound degradation in highly diverse and heterogeneous municipal landfill microbial communities
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Northern peatland microbial communities exhibit resistance to warming and acquire electron acceptors from soil organic matter
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… (thermophilic) microbes are of interest for their potential use in number of biotechnological applications. Molecular … archaeal lineages, the team relied on a combination of phylogenomic analyses, transcriptomics for microbial genomic … the archaeal lineage, information that they believe will lend insights into discussions on the origin of archaea. …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and unknown. The challenge remains to learn more about what microbes are present in any given …
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JGI Welcomes New UEC Members
… The JGI User Executive Committee (UEC) represents the JGI user … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who … who represent the scientific areas of plant genomics, DNA synthesis and metabolomics, respectively. To …
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Nick Everson
… Lab Automation, and Administration departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial … Prior to his tenure with Berkeley Lab, he served in the US Navy for 6 years as a submarine electrician and a … and planning related to the JGI’s infrastructure and business functions. He acts as a resource and provides advice …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… well as the evolution of seed plants, the fern’s distant cousin. Ceratopteris richardii, or C-fern, specifically has … undeniable power of plants, and the lessons they can teach us, are why the U.S. Department of Energy (DOE) Joint Genome … of plant-based biofuels and bioproducts. ( Learn more about OGG in  this episode of to the JGI podcast Genome …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of … that is transferable to other systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. Summary Life is all about balance. This study,  recently published in the  …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… amount of biomass which could then be converted into sustainable biofuels . For its importance to the DOE mission, … At the 2021 JGI Annual Meeting, David Lowry talked about a multi-year study his student conducted involving … and environments. The long-term investments in both the genomics and gardens are helping these shrubby grasses …
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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