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Substrate-restricted methanogenesis and limited volatile organic compound degradation in highly diverse and heterogeneous municipal landfill microbial communities
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Plant-Microbial Interactions Group
… detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … influence, and are influenced by microbial partners. We use a variety of genomics-powered tools to study this … (Tokyo University) Dongfong Wang (Spelman University, VFP Program) Emerald Nash (UC Merced Intern) Tyrome Sweet (UC …
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JGI@25: The Little Alga That Could
… production in other algae that may be more viable for sustainable biofuel production. The JGI published a partial … by Daniel Rokhsar, head of the JGI’s Computational Biology Program, along with JGI Computational Scientist Simon … “This is important because the textbook dogma is that in eukaryotes, one protein is produced from one RNA,” Merchant …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy … hold clues to how humans could do the same on an industrial scale to produce biofuels . Since one of the … expanded into three other universities. You can learn more about how JGI data supports higher education in this JGIota …
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Scaling Up Existing Skill Sets
… experience working intermediately between academia and industry, which is something I didn’t even know existed before. … my Ph.D. What is/has been one of your favorite things about your JGI internship?  Doing the JGI internship has … from private industry. I really liked the fairly flat organizational structure, and found everyone to be welcoming …
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of … several plant genome projects through the Community Science Program. As a UEC member, he’s interested in finding ways to … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who …
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Axel Visel
Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic … the JGI's Deputy for Science Programs. Click to learn more about our seven science program — their areas of focus, …
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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UC Merced Interns Reflect on Their JGI Summer Projects
… wide — from implementing new data visualization tools, to using natural language processing techniques to categorize genetic information. Learn more about their work here in a series of videos produced by JGI … at the end of the summer. The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring …
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Uncovering Novel Genomes from Earth’s Microbiomes
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … analyzed.” Emiley Eloe-Fadrosh, head of the  JGI Metagenome Program and senior author on the study elaborated on … she said. Listen to study co-author Dan Udwary talk about genome mining using the GEM catalog in  this episode …
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From Competition to Cooperation
… walls, while brown rot cannot break down the lignin but use cellulose. Finally, there are soil saprotrophs, which … in moving toward functional genomics studies to learn more about the inner workings of plant-host and … Interfaces Scientific Focus Area in the Genomic Science Program, the Office of Biological and Environmental Research …
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The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
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