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Better Living Through Bioenergy
… Pseudomonas putida to break down biomass and help bring about a more sustainable, biobased economy. They conduct research at the … Institute (JBEI) , a JGI partner and one of the four US Department of Energy Bioenergy Research Centers.  …
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Game On: High School Students Drive Everglades Metagenomics Study
… Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … the next generation of scientists. She shares her thoughts about the experience below. In the summer of 2018, Jonathan … Preserve. They chose this location because much is unknown about the diversity of organisms (taxonomy) and particularly …
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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
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JGI@25: Fueling Investigation into Methane-Making Microbes
… down potential biomass sources in ways we are only just beginning to understand. A better understanding of rumen … from 14 organizations across nine countries. Learn more about the Hungate1000 work led by AgResearch collaborators … inhibit microbial methane production. Another effort is in using microbial understanding to formulate a vaccine for …
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JGI@25: Studying Sorghum’s Survival Skills
… sorghum’s survival secrets could change not only how we use and grow sorghum, but other important crops as well. In … of sorghum projects at the JGI: 2009: JGI and collaborators use whole-genome shotgun sequencing to analyze the … sorghum plants in drought conditions for three years (2016-2018) in the field in Parlier, California at the UC …
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Trent Northen
… leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental … to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments …
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Webinar: SIP technologies at EMSL and JGI
… and the JGI’s Rex Malmstrom provided background on the various isotope-related technologies available at JGI and EMSL … the pandemic. 3. Q: What instrument / method does the JGI use to pre-screen DNA for enrichment? A:  The JGI uses … C13 and sort of the isotope of proteomics, what about doing this with metabolites at EMSL? A:  The answer to …
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You Can Move, But You Can’t Hide
… identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic … cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in virtually all of … biogeochemical cycles around them. By understanding more about the genomics of MGEs and their evolution at the …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… from plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar … would depend on the sample. However, we don’t do this because they typically contain salts and other contaminants that … with metabolomics analysis.  Q: Can you give us an idea about the scale of an average study? How many samples are …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… for Audio   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two … meetings were still a thing, i.e. in January. She talked about her  Community Science Project proposal with JGI, in … that’s an example of a yucca species. And the cool thing about yuccas is that there are closely related species that …
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JGI & KBase at PAG XXVII
… by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to … with the JGI Community Science Program, and how you can use the KBase system to accelerate your plant genomics … Genomics Building (IGB). Click here to learn more about this move. …
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Building Sphagnum Genomic Resources
… resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel … decomposed matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high … the University of Konstanz and the University of Vienna  reported recovering draft metagenome-assembled genomes for …
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