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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow

Sequence-based bioprospecting of myo-inositol oxygenase (Miox) reveals new homologues that increase glucaric acid production in Saccharomyces cerevisiae

Nitrogen fixation in Pampinifervens, a new species-rich genus of Aquificaceae that inhabits a wide pH range in terrestrial hot springs

Characterizing Communities: JGI Announces Latest CSP Portfolio

… proposes to develop high quality reference genomes for 10 individuals from each of the following five species: …

Building Wet and Dry Lab Skills

… the plants and extracting DNA. They also analyzed 16s amplicon data to determine microbiome composition. This …

The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features

Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis

High-quality draft genome sequence of Rhizobium mesoamericanum strain STM6155, a Mimosa pudica microsymbiont from New Caledonia

IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes

Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments

JGI@25: Cow Rumen and the Early Days of Metagenomics

… to more sustainable energy production. However, less than 10% of the microbes found in any environment can be grown in … laboratory — and rumen microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the … (Only 90 of those genes were actually tested in the 2011 paper. In 2015, the study’s dataset became material for a …

The Power of One, Amplified

… was then used to produce a paired amplicon dataset (a.k.a. 16S rRNA gene sequencing), a shotgun metagenome, and a … User Facility, is supported under Contract No. DE-AC02-05CH11231. This work was supported in part by a Natural Sciences … work was also sponsored by NSF grants DEB-1441717, OCE-1335810, and OIA-1826734 to RS. …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.