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DOE JGI Metagenome Workflow
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Informatics Advisory Committee
The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, guidance, and counsel on the effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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Best Practices for Successfully Writing and Publishing a Genome Announcement in Microbiology Resource Announcements
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EcoFABs: advancing microbiome science through standardized fabricated ecosystems
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A Complex Confection Decoded: Sugarcane Reference Genome
The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … Institute. The work was partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane …
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New Research Sheds Light on Diversity in the Deep Sea
… deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the … — influence the makeup and functioning of a given microbial community. Scientists with the U.S. Department of Energy … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following Code of … policy. Our aim in hosting an event is to build a stronger community. Our goal is to create an environment where …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … users for analyzing viral datasets, and the organization of community-building efforts in the field of viral … microbiome. Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome …
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Cultivating Symbiotic Antarctic Microbes
… they are symbionts and not free-living organisms. The Science Researchers employed multiple microbiology and … and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … Council (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to … in rhizosphere microbial community assembly. Nat Microbiol. 2018;3: 470–480. 7. Louie KB, Bowen BP, McAlhany S, Huang Y, …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative framework …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the science. Hear diverse voices in science talk about their groundbreaking …
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