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SIPs with Standards
Stable Isotope Probing (SIP) is a powerful technique for studying … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … multiple teams and analyses. This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few …
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A Plantiful Future: Xiaohan Yang
Xiaohan Yang, a scientist at Oak Ridge National Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of different plant species …
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JGI-USCCN Strain Sequencing Opportunity
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …
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Krishna Palaniappan
… (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …
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Jinghua Jenny Huang
… and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and files in various …
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Uri Neri
… days wrangling viral genomes and occasionally remembering to document his code. At JGI, he develops tools for viral discovery and analysis, with a particular …
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Back in the Lab: the 2023 Summer Intern Experience
… in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 gave interns the opportunity to be fully immersed in not only their work, but the opportunity to collaborate with and learn from fellow researchers onsite …
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Petra Byl
… oligotrophic ocean gyres. She uses genomic and transcriptomic sequencing along with laboratory manipulations to understand how nutrient stress impacts virus-host …
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A Powerful Technique to Study Microbes, Now Easier
Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity …
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Cracking the Secrets of the Diatom’s Shell
Biofuels and bioproducts are a way to kick our addiction to fossil fuels. In this episode, we peek into how … research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy …
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JGIota: Looking Back at Sequencing for Soybeans
… could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the … With a full genome sequence, researchers have been able to look into soybean’s strengths – along with a fungus that threatens …
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