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Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … by more than 100 participants. Roughly 700 have been sequenced and annotated, representing 384 fungal families … of this project is its focus on wild species as opposed to crop plants. Because crop plants have been manipulated over …

MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the … Lab. geNomad is now accessible through the National Microbiome Data Collaborative’s EDGE platform. The Impact In …

National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel … compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . 6(7):960-970. Nayfach S, et al. …

She conducted her postdoctoral training in human microbiome research at the Institute for Genome Sciences at … in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative (NMDC). … Emiley Eloe-Fadrosh … Kelliher JM, et al. 2023. Cohort-based learning for microbiome research community standards. Nat Microbiol . …

Ivanova, senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA …

Every year, the JGI sequences around 35,000 samples — from plants, algae, …