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… MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the … Lab. geNomad is now accessible through the National Microbiome Data Collaborative’s EDGE platform. The Impact In …

… model species like P. hallii , researchers can develop crop improvement techniques that could be applied to … Through the JGI’s Community Science Program , JGI sequenced and assembled near-complete genomes of P. hallii … complete) and P. hallii var. filipes (94.8% complete) and resequenced a host of natural collections from across the …

… of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural similarities in proteins that low sequence identity may belie. The technology he’s using is … Deep learning algorithms can vectorize faces… … so, why not proteins?         …

… — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help … tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein … Those similarities, based on their ratios of small DNA sequence fragments called tetranucleotides, are a way to …

… Every year, the JGI sequences around 35,000 samples — from plants, algae, …

… Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … by more than 100 participants. Roughly 700 have been sequenced and annotated, representing 384 fungal families … of this project is its focus on wild species as opposed to crop plants. Because crop plants have been manipulated over …