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Mimi Lynde
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Graduate Students Get Thesis Research Opportunity at the JGI
… at one of the DOE national laboratories or national user facilities. As a result of the latest call , a total of … mission areas across the 6 Office of Science research programs. Among the recipients of the latest SCGSR award is … the Baker lab to study microbial communities from sediment samples across spatial and temporal scales. Rambo also plans …
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Mindfully Moving JGI
… of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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Comparative Transcriptome Analysis of Methylibium petroleiphilum PM1 Exposed to the Fuel Oxygenates Methyl tert-Butyl Ether and Ethanol▿ †
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Olpidium, The Key to the Origin of Terrestrial Fungi
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in … 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following … times in order to obtain enough zoospores. DNA and RNA samples generated from the zoospores were then sent to the …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… messenger RNA sequences (transcriptomes) from their soil samples. This gene expression dataset was particularly … out these distractions. Combining genome and transcriptome information allowed the team to have a much more … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Sequencing Submission Requirements for DNA Synthesis
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A Plant Root Atlas for Tracking Developmental Trajectories
… nearly 100,000 single root cells and combining the information with previously published datasets. The work … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader perspective:  …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
University in Israel, the National Center for Biotechnology Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (metatranscriptomes) generated from diverse environmental samples around the world, resulting in a five-fold increase …
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Len Pennacchio
Additional duties of this Deputy include interacting with users seeking to exploit new genomic technologies and … a vision for future technical JGI directions for DOE User science. … Complete Publications Genomic Technologies …
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DOE Metrics
… hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators (PIs), Co-PIs, and collaborators. *Unique users are counted once, even though an individual may have … target in Q2 is due to planned upgrade of the Laboratory Information Management System (LIMS) and temporary shut down …
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Building Sphagnum Genomic Resources
The pathway’s reversibility could be a factor in determining if the peatlands act as a carbon sink or a carbon … research results, building on the availability of genomic information from two distinct environments, strengthen the … In addition, this work reflects a collaboration between two programs within different Divisions of the Office of …
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