Search

Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, … users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We … attendees with a rich agenda across our scientific programs, as well as workshops that gave participants …

… graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group … Graduate Student Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane …

… global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative … of archaeal and bacterial type strains ( GEBA-type strains project ), the delineation of host-virus interactions, the …

December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … the map: continental-scale context for thousands of newly sampled microbial genomes from North American watersheds … poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types available” …

… (Sunny) Liao of the University of Florida collected forest samples of poplar and soil from Washington and Oregon. The … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community Science Program in … 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science …

… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … through the Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI … to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using …

… in terms of their natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore … like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix … connected with a wonderful person who’s a Co-PI on a JGI project Amy Schaefer . So we’ve been friends ever since. …

… joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the … Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley lab. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de …

Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well …

… rhizobacterium (PGPR) Pseudomonas simiae WCS417. One suggested function of these phage genes is the … and fungal expression patterns in root cross-sections. … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z …

… (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … In addition, this work reflects a collaboration between two programs within different Divisions of the Office of … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment …

That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have …  resources, these researchers will dive into a range of projects spanning the resilience of desert grasslands to the … for this annual call; the next deadline for proposal submission is October 4, 2024, for inclusion in the December …