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Len Pennacchio
… more about the offerings and capabilities we offer JGI users to help advance their science. … Additional duties of this Deputy include interacting with users seeking to exploit new genomic technologies and … a vision for future technical JGI directions for DOE User science. …
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Data Ecosystem
… partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a … and help unravel these complexities  This ecosystem serves users better in the following ways: Data integration is … by artificial intelligence and other tools. By bringing users together through our systems, we build far-reaching …
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How Filamentous Fungi Sense Food
… these fungi detect which complex chains are available; this information triggers pathways to determine which enzymes … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … work was enabled in part through JGI’s Community Science Program through a proposal akin to the Encyclopedia of DNA …
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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Information theory and machine learning illuminate large‐scale metabolomic responses of Brachypodium distachyon to environmental change
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Ben Bowen
… expertise in spectral alignment, molecular networking, chemoinformatics, and bioinformatics facilitates impactful scientific discoveries, … supporting the DOE’s Biological and Environmental Research user community in their bioenergy and environmental … Achievement 2012 UC Berkeley, Leadership and Development Program Awardee 2005-2009: NIH K25 Mentored Career …
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Danielle Goudeau
… and 16S sequencing. She also develops novel flow cytometry protocols for targeted recovery of specific microbes. …
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CalTeach
… CalTeach is a program for undergraduate majors interested in developing a …
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A Natural Mechanism Can Turbocharge Viral Evolution
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence Berkeley National … in single microbial and viral genomes, as well as genomes sampled all at once from the same environment, called … support the idea. Study coauthor Stephen Nayfach, a JGI bioinformatics research scientist, found that pieces of viruses …
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Microbial Community Analyses Inform Geochemical Reaction Network Models for Predicting Pathways of Greenhouse Gas Production
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… for “regular” vs the ultra-low input library creation protocols for PacBio? A(nswer):  Regular PacBio typically requires ~ 1.5-10 ㎍. Low-input protocols are continuously improved, but currently require … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Natural Prodcast Episode 2: The Primer, Part 2
… of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You can find links to transcripts, more information on this episode, and our other episodes at …
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