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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in … a carbon fixation process known as the C4 pathway, which particularly helps plants thrive in warm, arid environments. … JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been possible without their …
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DOE JGI Interns Share Their Summer Experiences
… the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching … and also do some computational analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and … worked with Zhong Wang’s group on an aspect of the same project assigned to Sharon and Cristhian; and, Lizhen Shi , …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … Laboratory, have collaborated with global researchers on projects related to understanding how the interactions … JGI colleagues Antonio Camargo and Simon Roux. Kyrpides is part of another project led by Owen White at the University …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a … production anymore, but for other bioproducts.”  This is Part 2 of our three-part “Guts R Us” series. You can find Part 1 here . …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using … zealexins. These genes were synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  …
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Identifying the Microbial Cleanup Crew at a Superfund Site
PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … in 2007 to achieve this goal. In less than four years, parts of the shallow portions of the groundwater were nearly … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by …
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … tick. He’s working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … of the five major cotton lineages. Grimwood was also part of the JGI team that contributed to the multinational …
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An Integrated Dataset to Understand Ecosystem Interaction
… relationship between poplar trees and their microbial partners. The Science To help better understand how … data set will help identify how different elements of the ecosystem interact and respond to changes in the … (LANL), and DE-AC05-76RL01830 (PNNL). … BioScales project on JGI Genomes Online Database … BioScales project …
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … also carries out custom preparative work for difficult user projects, including those that require fluorescence …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , one of DOE’s highest honors! Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial …
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