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A bacterial metapopulation adapts locally to phage predation despite global dispersal
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Global overview and major challenges of host prediction methods for uncultivated phages
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Identification of over ten thousand candidate structured RNAs in viruses and phages
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How Filamentous Fungi Sense Food
More importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … the gene regulatory networks as they responded to available carbon sources, which ranged from simple sugars to plant … factors to better understand how nutrients are acquired and carbon is metabolized in filamentous fungi. The work also …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… first to dig into a forest floor ecosystem to discover what carbon- and nitrogen-metabolizing enzymes are abundant, and … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … Integrating Collaborations for User Science (FICUS; #49499) program and used resources at the DOE Joint Genome …
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Natural Prodcast Episode 16: Marcy Balunas
… a long time whenever you did a genome sequence, in about 40% of the genome the genes were completely unidentifiable. … That is one of the really big frontiers for the next stage of natural product drug discovery I think. Or even … computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product diversity and …
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Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance
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Reekeekee- and roodoodooviruses, two different Microviridae clades constituted by the smallest DNA phages
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CRISPR — a widespread system that provides acquired resistance against phages in bacteria and archaea
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High-Quality Draft Genome Sequence of the Opitutaceae Bacterium Strain TAV1, a Symbiont of the Wood-Feeding Termite Reticulitermes flavipes
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… assemblies, revealing the roles of microbial communities in carbon cycling, in interactions with plants, and as drivers …
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Rex Malmstrom
… the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … Boston University ( magna cum laude ) … Serrano et al. 2024.  Spatial co-transcriptomics reveals discrete stages of …
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