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Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria
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Complete genome sequence of Deinococcus maricopensis type strain (LB-34T)
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… a number of notable achievements that showcase our collaborations and capabilities to enable great science that … and resources focused on three human chromosomes: Lawrence Berkeley National Laboratory researchers were studying … investigated Chromosome 16, which contains about 3% of the human genome. They wanted to learn about the genes …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a … person at the Walnut Creek Marriott the week of September 30 – October 4, 2024.  … The U.S. Department of Energy Joint …
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Marine Microbe Contains Multitudes
… community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of … can carry out. The work on single cells was done in collaboration with scientists Tanja Woyke and Rex Malmstrom at … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), through the JGI …
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Streamlining Regulon Identification in Bacteria
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Transcription factors control … 18, with the number of factor-gene pairs almost doubling to 399. Two of the 11 sigma factors addressed in the study were …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), has developed a command-line tool …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… or C-fern, specifically has been studied in plant research laboratories and plant biology courses across the globe for … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) took on the Open … generate high-quality genome assemblies and annotations for 35 species representing all major evolutionary lineages in …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… for a stressed typical plant, one that does what’s called C3 metabolism, named for a 3-carbon compound that plays an … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of …
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Draft Genome Sequence of Mn(II)-Oxidizing Bacterium Oxalobacteraceae sp. Strain AB_14
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Tanja Woyke
… she deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, … also holds an Adjunct Scientist appointment at the Bigelow Laboratory for Ocean Sciences since 2012 and an Adjunct … Science Advisory Board Member for Science Department, Berkeley City College, (2015-current) Organizing Committee …
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Jinghua Jenny Huang
… and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and files in various formats. …
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