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… data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … the low maintenance, it can produce an impressive amount of biomass which could then be converted into sustainable … biomass-based fuels.   … P. virgatum on Phytozome … Plant Dataset …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published … on PhycoCosm … C. zofingiensis on Phytozome … Algal Datasets … Plant Datasets …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the … on Phytozome  … Filling in the Plant Tree of Life … Fungal Dataset … Plant Datasets … Genome Insider …

Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … Institution of Oceanography … Vyshenska D, et al. 2023. A standardized quantitative analysis strategy for stable …

… impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave event in the ocean known as “The … as hurricanes and droughts. Another one began in late 2013, when a large patch of warm ocean water about a third the …

… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … play a critical role in the global carbon cycle, and are of significant interest for their potential contributions to … as an energy source.  Until recently, our understanding of these methanogenic microorganisms was narrowed to a type …

… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts … Biology, Université Blaise Pascal, France … Neri et al., 2023. Expansion of the global RNA virome reveals diverse clades …

… function in bacteria. Since 2016, he has been the lead of the User Support Analysis group. The group performs … transcriptome, epigenome and other functional genomics datasets generated by JGI user science projects. … BS in … Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  …

A special issue of Synthetic Biology celebrates research enabled by the JGI … and synthesis work. This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley …

… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … the sugar glucose to the products including ethanol and 2,3-butanediol (BDO). To do so, the yeasts received … haven’t changed,” noted Northwestern graduate student Blake Rasor. He and Yi, one of the study co-authors, have …

… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … — they rely on enzymes that have been evolving for billions of years. However, these enzymes are often loosely … fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified across …