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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa … Additionally, 40 percent of the proposals were submitted by researchers who had not been a primary investigator on … millet, grown without fertilizer and under erratic rainfall conditions. To help mitigate drought, famers are growing …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in … any host will do. It must be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these … program,  described in Plos Biology , the research team led by scientists at the U.S. Department of Energy Joint Genome …
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Honey Bee Gut Microbiota Divvy Up Dinner
… bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are … that pollen’s pectin and hemicellulose are degraded mainly by just two clades:  Gilliamella,  which mostly resides in … are abundant in glycoside hydrolases, and are thus better adapted than  Gilliamella  to breaking down hemicellulose. …
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Products
… as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw … ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a biologically relevant unit from …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Switchgrass is a native, shrubby grass that can grow year-over-year on marginal soil and … research is also informing how these grasses have adapted to a range of climates and environments. The …
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Differences in crop bacterial community structure between hoatzins from different geographical locations
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Integrated analysis of homozygous deletions, focal amplifications, and sequence alterations in breast and colorectal cancers
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
Genomics Capabilities Webinar inviting researchers to submit white papers to the Community Science Program’s  … proposal call is open year-round, but proposals submitted by July 30 will be included in the next review. “So webinars … (formerly DNA Synthesis) call, and he noted the data had driven his lab’s focus on guide RNA library generation and …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play an outsize role in cycling carbon and … in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom Fragilariopsis cylindrus . At … CSP projects publicly available at the PhycoCosm portal . Byline: Menaka Wilhelm   … The U.S. Department of Energy …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the … Archaea are key players in this deep biosphere. They have adapted to acquire carbon efficiently and convert it to … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome …
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The environment drives microbial trait variability in aquatic habitats
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Co‐catabolism of arginine and succinate drives symbiotic nitrogen fixation
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