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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… hosts release organic carbon. Understanding these complex symbioses between organisms feeds into a better …
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Alabama A&M Interns Access An Abundance of Knowledge
… and microbiome. The rhizosphere is the area surrounding the roots of a plant in the soil. And I’m specifically working …
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An Integrated Dataset to Understand Ecosystem Interaction
… trichocarpa ) trees, as well as the soil surrounding their roots (known as the rhizosphere), researchers hope this … able to analyze the DNA of microbes living around the tree roots in the rhizosphere. Metabolomics allowed them to then …
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Special Initiatives & Programs
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, … Tools and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash : What I’m … manipulating huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev and Asaf Salamov, and … “Fungi are the masters of adaptation,” Wint explained. The fungal kingdom contains over one million different species … theory — the most expressed genes found across each of the fungal species were protein-coding hotspots. “Ensuring that …
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JGI@25: Strengthening Soybean
… … 3 P. pachyrhizi genomes on MycoCosm … Plant Datasets … Fungal Datasets …
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New Lineages of Life Group
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Making a Lichen Together
Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy …
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MycoCosm Tutorial
Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with …
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Natural Prodcast Episode 3: The Primer, Part 3
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Gut Fungi: Unexpected Source of Novel Chemicals
… . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first time, that this … , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of … only by aerobic fungi. In order to identify more of the fungal natural products, O’Malley and her team plan to use …
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