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TbasCO: trait-based comparative ‘omics identifies ecosystem-level and niche-differentiating adaptations of an engineered microbiome
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Drought shifts sorghum root metabolite and microbiome profiles and enriches for pipecolic acid
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Finding the Fermenters
… to convert food into energy. However, in environments with little or no oxygen, life had found other ways to … form of metabolism, researchers recently compiled a list of with more than 8,300 organisms from multiple sources, … One test was to predict traits of more than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more … microorganisms is incredibly useful for understanding the microbiome of the earth, but most species do not grow easily … method could also improve genome recovery in microbiome studies, these scientists (now at Stanford University) …
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Tanja Woyke
School of Natural Sciences since 2015. Prospective users with specific questions regarding their proposed research … 20: 721 Nayfach et al. 2021. A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. Schulz et al. … Metagenomic discovery of biomass-degrading genes from cow rumen. Science 331, 463-467. Swan et al. 2011. Potential for …
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Restoring wetlands on intensive agricultural lands modifies nitrogen cycling microbial communities and reduces N2O production potential
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A single-cell genome perspective on studying intracellular associations in unicellular eukaryotes
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iPHoP: A Matchmaker for Phages and their Hosts
… these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of … processes like  carbon fixation , nitrogen cycling and methane production. Meanwhile, environmental viruses are … it predicted many more likely hosts for viruses in human microbiome samples, reflecting factors such as the quality …
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
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Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery
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Heterospecific Neighbor Plants Impact Root Microbiome Diversity and Molecular Function of Root Fungi
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