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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March … took effect in six San Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is …   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the … The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring students to embark on a career …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our collaborations and …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … in proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … group at the JGI, whose team uses a semi-automated, standardized process to carry out the onerous SIP sample …
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Bacterial Genome Annotation
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for … Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …
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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … Fungal & Algal Program lead at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …
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Scientific Advisory Committee
Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, … of CSP projects and, with concurrence from the DOE Office of Biological and Environmental Research (BER) …
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