Expanding standards in viromics: in silico evaluation of dsDNA viral genome identification, classification, and auxiliary metabolic gene curation
Results
VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families
Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses
Complex transcriptional regulations of a hyperparasitic quadripartite system in giant viruses infecting protists
Taxonomic distribution of metabolic functions in bacteria associated with Trichodesmium consortia.
Metapangenomics reveals depth-dependent shifts in metabolic potential for the ubiquitous marine bacterial SAR324 lineage
Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil
Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions
MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets
TRIMER: Transcription Regulation Integrated with Metabolic Regulation
Diversity and biogeography of SAR11 bacteria from the Arctic Ocean
Identification of novel biomass‐degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation
