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Metabolic Modeling of Fungi
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Waiting to Respire
… ability to produce their own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of … development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria … Margulis). The information was then used to predict the metabolic strategies applied by a common ancestor to all …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an … other researchers to study the genomes and predict the metabolic abilities of these microbes. The Impact This study … community brings together the data resources enabled by the DOE Biological and Environmental Research (BER) …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and Biotechnology, University of Crete, … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … internship in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev and Asaf Salamov, …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … world have been forced to confront the awesome power that viruses have to affect nearly every aspect of our daily … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Advantages and Limits of Metagenomic Assembly and Binning of a Giant Virus
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Giant viruses with an expanded complement of translation system components
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Minimum Information about an Uncultivated Virus Genome (MIUViG)
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IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses
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Numerous cultivated and uncultivated viruses encode ribosomal proteins
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Diversity, taxonomy, and evolution of archaeal viruses of the class Caudoviricetes
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