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Extracting the Secrets of Secondary Metabolites
CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial … Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due … payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers with a powerful addition to …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
On July 30, UC Merced students and their JGI mentors toasted to the end of a … virtual internship. The celebration was preceded by short final presentations attended by more than 75 JGI … pairs undergraduate and graduate students from UC Merced with at least one JGI mentor. Together, they work through a …
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Assembly and Succession of Iron Oxide Microbial Mat Communities in Acidic Geothermal Springs
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Examples: Successful LOIs & Submissions
… for User Science calls. These documents have been shared with permission from the PIs who drafted them.  … … crops … Characterization of simplified soil communities with high and low carbon use efficiency across differing … processes and trophic interactions in Antarctic cryptoendolithic communities … CSP Large-Scale LOI #1 … CSP …
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The Power of One, Amplified
… complements metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant …
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A telomere-to-telomere genome assembly resource of Bipolaris sorokiniana, the fungal pathogen causing spot blotch and common root rot diseases in barley and wheat
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Transposon Mutagenesis Paired with Deep Sequencing of Caulobacter crescentus under Uranium Stress Reveals Genes Essential for Detoxification and Stress Tolerance
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Micro-Scale Applications Group
… that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely …
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Outreach Stories
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Functional Metagenomics of Spacecraft Assembly Cleanrooms: Presence of Virulence Factors Associated with Human Pathogens
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Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
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