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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy Institute (JBEI). … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE …
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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … that hosted a series of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … mutant collections, transformation technology, epigenetic analysis techniques) and utilizing these resources to … the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution …
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MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
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Making a Lichen Together
… For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … could help inform efforts at bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens … carbon and nitrogen fixers in alpine and high latitude ecosystems, deciphering their internal molecular mechanisms can …
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Global Archaeal Diversity Revealed Through Massive Data Integration: Uncovering Just Tip of Iceberg
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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MGM Workshop at Fisabio Summer School 2025
… sessions will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …
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Next generation sequencing data of a defined microbial mock community
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Learning to Look
… a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the … are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not sure why we systematically manage to miss them; maybe it’s due to the …
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Comparison between Ribosomal Assembly and Machine Learning Tools for Microbial Identification of Organisms with Different Characteristics
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