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Genome Project, he began developing larger comparative genomic systems as the JGI’s eukaryote research efforts … 72, 411. Gordon et al., 2020.  Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … stages of connecting molecules and genes. And then genomics happened. Dan: Yeah, I did my first genome sequence …

Miscanthus  sequence offers insights into benefits of polyploidy and … perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis … models,  Miscanthus has a large and complex genome whose evolutionary history and perennial lifecycle makes it …

… working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … algae, and plants, while focusing on understanding the evolution and function of proteins involved in metal … Google Scholar … Education … Awards and Service … Selected Publications …

… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … rot fungi in the genus Lentinula. Dan Rokhsar looked to the evolutionary history of strawberries as part of a study to … as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and found that, …

A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be available for … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …

A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … of the genome , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic diversity across the natural range of …