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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 … genes has helped pave the way for the conception of a pangenome. Recordings and recaps of all three keynote talks … and her team are building on this discovery to address a wide range of new questions — from basic research, like …
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Ecological divergence of syntopic marine bacterial species is shaped by gene content and expression
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … annual JGI User Meeting, as well as input on other aspects of the meeting such as duration, location, and cost; …
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A roadmap for equitable reuse of public microbiome data
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how fungi that feed …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … 28,000 unique MCP sequences.  Further analysis led to the identification of 328 “high quality” (based on completeness) …
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Disclaimer
… resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … neither the United States Government nor the University of California nor any of their employees, makes any …
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Identification of mobile genetic elements with geNomad
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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … team that combined field data with a reference switchgrass genome to associate climate adaptations with switchgrass … developments that will enable researchers to move from identification of microbial novelty to assigning metabolic …
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