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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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IMA genome-F18
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic biology, Robert Evans and Jan-Fang Cheng in the …
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User Support Analysis Group
… transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing …
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Cultivating Symbiotic Antarctic Microbes
The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and cultivated microbes, …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern … — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … gene duplications, and even more ancient gene transfers from bacteria have all armed the plant with an array of …
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Genome Sequence of Victivallis vadensis ATCC BAA-548, an Anaerobic Bacterium from the Phylum Lentisphaerae, Isolated from the Human Gastrointestinal Tract
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … break down the components of plant cell walls, which range from simple to complex carbohydrates, and then convert them … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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Novel Insights into the Diversity of Catabolic Metabolism from Ten Haloarchaeal Genomes
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The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing
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