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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … Laboratory (Berkeley Lab), and collaborators across multiple other research centers around the world. “We’ve …
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Genome Sequence of Victivallis vadensis ATCC BAA-548, an Anaerobic Bacterium from the Phylum Lentisphaerae, Isolated from the Human Gastrointestinal Tract
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Genomic and proteomic biases inform metabolic engineering strategies for anaerobic fungi
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … Scientists at Brookhaven National Laboratory’s NSLS-II used multiple x-ray techniques combined with advanced … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop … crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … of clonally propagated plants to address these questions.” Multiple collection methods were applied to gather the …
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Learning to Look
… Machine learning approach significantly expands inovirus … “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! … influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … more than two copies, a condition known as polyploidy. The multiple copies arise from past genome duplication, which …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … Finding the RNA virus snowflakes in the snowstorm of genomic data involved developing special computational sieves …
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A near complete snapshot of the Zea mays seedling transcriptome revealed from ultra-deep sequencing
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One Complete and Seven Draft Genome Sequences of Subdivision 1 and 3 Acidobacteria Isolated from Soil
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