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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data … sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human … departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial and logistics … The Deputy of Operations provides oversight and leadership of JGI operations …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … put together what they called the Hungate1000, a catalog of 410 rumen microbe genomes. The project relied …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Getting to the core of the gut microbiome
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A blueprint for contemporary studies of microbiomes
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Tina Clarke
… Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources … her HR journey after obtaining her BA degree in Psychology from Sonoma State University. Early on, Ms. Clarke knew the importance of understanding human and group behaviors as her role in HR … Lawrence Berkeley National Laboratory, Berkeley, CA/ Sr. …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 computationally identified …
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Assembly, comparative analysis, and utilization of a single haplotype reference genome for soybean
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … This work was supported by an intramural seed grant (IGSP 2008001) to …
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