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Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature … small genomes, short life cycles and can be easily transformed, traits that make them easy to work with … quality genome assemblies for all three grasses. With these datasets, researchers made a pan-genome containing four  B. …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the …

… ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and … first legume species with a published complete draft genome sequence. At the time, the vital global source of both … and that’s going really well. And having the sequence data available for us to enable that research will have a …

Database provides details on river microbes in 90% of US … States. They also provided multiple access points to the information. The team harnessed a community-science program to … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …

… of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta Gribaldo of the Institut … the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) …

For the first time, a team analyzes the transcriptomes of a … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared … variation in its progeny. The study’s transcriptomic data also identified many genes potentially important for …

… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of … this project too. I’m really looking forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

… research has been focused on semantic and object-oriented data modeling, and biological data management. She was one … of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. … Computational Resource Lead at the JGI, responsible for the data management infrastructure of the Integrated …

… which could then be converted into sustainable biofuels . For its importance to the DOE mission, switchgrass is among … candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a … switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and …