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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
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Genome Insider
… Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host Menaka Wilhelm interviews researchers — JGI Users — and dives into their work on all kinds of … and fungi to microbes and viruses. Listen in to explore the data that illuminates biology, and hear how it could power …
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Graduate Students Get Thesis Research Opportunity at the JGI
… SCGSR award is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of … to answer our most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have … to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of resolving …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial … community able to not just analyze but also create DNA sequences mimicking an array of microbial life. By … available data, GenomeOcean employs artificial intelligence for cutting-edge genomic research — and is capable of …
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Supporting Global Research into Actinomycetes
… The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, as well as a … user-available API’s offer a space to not just store data, but for the community to discuss those data and make …
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OpenMSI Arrayed Analysis Toolkit: Analyzing Spatially Defined Samples Using Mass Spectrometry Imaging
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Arabidopsis Root Microbiome Microfluidic (ARMM) Device for Imaging Bacterial Colonization and Morphogenesis of Arabidopsis Roots
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Prepublication data sharing
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Clustering Categorical Data
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to their User Executive … of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist … in access, analysis and sharing of JGI-generated data. She is also interested in reaching and engaging with …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential … carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact …
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JGI Welcomes New UEC Members
… The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and …
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