The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Results
iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
Diversity in the soil virosphere: to infinity and beyond?
Virus ecology and 7‐year temporal dynamics across a permafrost thaw gradient
A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts
Decrypting bacterial polyphenol metabolism in an anoxic wetland soil
Metagenome-Assembled Genomes from a Microbiome Converting Xylose to Medium-Chain Carboxylic Acids
Nitrite Oxidizer Activity and Community Are More Responsive Than Their Abundance to Ammonium-Based Fertilizer in an Agricultural Soil
Transcription Factor Family-Based Reconstruction of Singleton Regulons and Study of the Crp/Fnr, ArsR, and GntR Families in Desulfovibrionales Genomes
ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies
Short-Term Nitrogen Fertilization Affects Microbial Community Composition and Nitrogen Mineralization Functions in an Agricultural Soil.
Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
