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Evolution of a Fungal Gene Expression Regulator
… date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can … least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of … no. DE-AC02-05CH11231. The Georgia Advanced Computing Resource Center (GACRC) and Georgia Genomics and Bioinformatics …
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Gamete expression of TALE class HD genes activates the diploid sporophyte program in Marchantia polymorpha
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Partnerships: Myco-Ed
Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that … compile original data for improving fungal genomic resources empower students through isolation and genome … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ …
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Ray Turner Completes Last Tour of Lab Duty at JGI
Michael Brandt (Operations Deputy), Horst Simon (Science Deputy), Jeff Blair (Chief Laboratory Counsel) and … in his event remarks. “I feel that is something crucial to our success, and Ray has been that. That person needs … to the ever-shifting landscape of funding Federal for programs, noted that “Ray is someone who just will get it …
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JGI@25: From Life at the Extremes to Editing Genomes
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … seven. Doudna was recognized for her work on CRISPR-Cas9, technology described by the Nobel Foundation as having “a …
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place …   … This research was supported by the Bioenergy Technology Office (BETO) within the Department of Energy’s …
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A Grass Model to Help Improve Giant Miscanthus
… insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for … allows  Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such … to novel traits.  M. sinensis is a tetraploid, with four sets of chromosomes; the study showed that these sets …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… bioeconomy, including, potentially, methane as an energy source.  Until recently, our understanding of these methanogenic microorganisms was … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Picking Up Threads of Cotton Genomics
… underscores its value and importance in the fabric of our lives. In the United States, cotton production centers … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … faculty investigators at the HudsonAlpha Institute for Biotechnology. “The goal has been for all this new cotton work, …
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Intrinsic and Extrinsic Programming of Product Chain Length and Release Mode in Fungal Collaborating Iterative Polyketide Synthases
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Fungal Friends or Foes in Plant Roots
… and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that … toward filling gaps on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled … roots: friends, enemies or frenemies? … Datasets … From our partners … Behind the Paper …
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Effects of Polar Light Cycle on Microbial Food Web
… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … dominates these polar environments greatly contributes to our larger understanding of carbon and other nutrient cycles … cycles. Water samples from Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A …
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