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JGI@25: Mapping Switchgrass Traits with Common Gardens
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … into sustainable biofuels . For its importance to the DOE mission, switchgrass is among the JGI Flagship Plants . … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked …
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Pinning Down a Piece of Photosynthesis
… is a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … National Laboratory’s National Synchrotron Light Source II, and SLAC National Accelerator Laboratory’s … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . … working to address some of the most pressing challenges of our time. For more information, please visit  …
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JGI-KBase Panel at SACNAS
… scientific contribution they make, whether as part of a course or internship, and before ever publishing a research … get credit for their contributions to science. A panel of DOE researchers, program managers, and intern alumni will introduce projects designed for students to gain research experience …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s …
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Gut Fungi: Unexpected Source of Novel Chemicals
… can breathe oxygen — just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness … natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first … genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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JGI User Executive Committee Expands
U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence … environments. He’s been involved in several plant genome projects through the Community Science Program. As a UEC … in finding ways to boost visibility of the CSP to encourage more plant proposals and provide feedback on …
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Game On: High School Students Drive Everglades Metagenomics Study
… class at Florida’s Boca Raton Community High School. The course had a defined set of objectives, and started with an … Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science … DNeasy PowerSoil Kits and sent the samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed …
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Fungus Fuels Tree Growth
… of particular interest to the U.S. Department of Energy (DOE). By better understanding how poplar responds to its … as secreted proteins. However,  M. elongata  seems to encourage the plant to have leakier cell walls and weaker … (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and …
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Rex Malmstrom
… also carries out custom preparative work for difficult user projects, including those that require fluorescence … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of … sweeps in natural bacterial populations. ISME Journal 10 (7), 1589 Kashtan, N et al. 2014. Single-cell …
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Uncovering Novel Genomes from Earth’s Microbiomes
… scientists, researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative knowledge … hope JGI and other institutions continue to do this kind of projects.” The work also used resources of the  National …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling … islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … researchers walked students through the processes of DNA sequencing, metagenome assembly, and even an introduction to …
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