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Emiley Eloe-Fadrosh
… viruses. Prior to joining the JGI, she was a Bioinformatics Program Fellow at the Gordon and Betty Moore Foundation as … et al. 2023. Cohort-based learning for microbiome research community standards. Nat Microbiol . 8(5):751-753. Nayfach … Evolution & Genomics, F1000Prime Reviewer for major journals and funding agencies and philanthropic organizations …
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JGI@25: Strengthening Soybean
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … been cited more than 5,400 times, including a number of projects that point to the potential of seed oils as … was just like rediscovering genetics, with the evolution of sequencing technologies and the evolution of …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked … Just as the common gardens have flourished, so has the community of switchgrass researchers grown. After almost two …
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Viral Genomics Group
Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary … overview and major challenges of host prediction methods for uncultivated phages.  Current Opinion in Virology .  49 … 4 , 1895–1906 Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core … compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … launched as an interactive public database for the research community. With more than 13 million BGCs in the catalog at …
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Picking Up Threads of Cotton Genomics
… underscores its value and importance in the fabric of our lives. In the United States, cotton production centers … analysis on JGI’s plant data portal  Phytozome , which is a community repository and resource for plant genomes. They … added. “We must be careful who we ask to take on these projects due to their difficulty and complexity, but we have …
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Trent Northen
… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the … (16), 567–571 (2019) doi: 10.1038/s41592-019-0465-0. Couradeau E et al. Probing the active fraction of soil …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… into a written report that is published in a scientific journal is the ultimate achievement. To get to this point … her summer internship in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev … now in her final year of PhD research at UC Merced. She plans to continue expanding her understanding of mathematics …
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Plant–microbiome interactions: from community assembly to plant health
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Polar Phytoplankton Need Zinc to Cope with the Cold
… (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this collaboration, in 2017, they published … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Enlarging Windows into Understanding Gene Functions
… of the alphabet. Yet the specific sequence of these four letters represents an organism’s genetic code, or … Center in Hungary. His approved proposal through the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as …
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