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… a consortium that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  … Tringe , and Tanja Woyke  were part of a “big data” mining effort reported in  Nature Biotechnology that led to … a JGI-led team that  applied machine learning to classify 101 representative genomes of Dothideomycetes, the largest …

Dr. Louie joined the JGI in 2014 to develop the metabolomics program, … analysis, creation of large metabolite databases by running 1000s of metabolite standards, and development of … A, et al. Anaerobic gut fungi are an untapped reservoir of natural products. Proc Natl Acad Sci U S A. 2021;118. …

University of California (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … site and then collect and process the samples starting at 10am Pacific time. JGI researchers helped develop the …

JGI innovates protocol revealing how genetic variations in … four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … their functional interpretation is as tough as it has been 10 years ago,” he said. “We thought about reconstructing …

In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on … joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley …

Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at what happens to that …

A workflow for capturing the genetic make-up of specific uncultivated microbes … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … cells that give off a much brighter signal. Cells from many natural environments are typically too dim to see by flow …

… and offers new clues into a unique environment in the natural world. The Impact From the polar regions to the deep … cycles. Water samples from Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… them. In the ocean, viruses outnumber surface microbes 10 to 1, and 20% to 40% of the microbes are infected at any … between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … virocells, to better represent how infections occur in natural settings. … A portion of this research was performed …