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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Three Join the JGI User Executive Committee
… lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological … Committee for the Ecological Society of America. He’s interested in how microbes influence biogeochemical cycles in soils and sediments and plant-microbial interactions in crops. He has been a PI or Co-PI on five …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare … metadata is collected via spreadsheet or directly via a web interface prior to shipping samples to the JGI. PI sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need …
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Metagenomic investigation of the geologically unique Hellenic Volcanic Arc reveals a distinctive ecosystem with unexpected physiology
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Common bacterial responses in six ecosystems exposed to 10 years of elevated atmospheric carbon dioxide
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The … : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further confirmed by …
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Conservation of linkage and evolution of developmental function within the Tbx2/3/4/5 subfamily of T-box genes: implications for the origin of vertebrate limbs
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A comparative genomics screen identifies a Sinorhizobium meliloti 1021 sodM-like gene strongly expressed within host plant nodules
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A Horizontal Gene Transfer Event Defines Two Distinct Groups within Burkholderia pseudomallei That Have Dissimilar Geographic Distributions▿ †
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User Advisory Committees
… of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace … community, and promotes communication and collaboration within the user community. … The SAC is a board convened by …
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Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T)
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Triggering Morel Fruiting
… also because they influence geochemical cycling in forest ecosystems. By deciphering the fruiting-related … nutrient supply to trigger its fruiting remains unknown. To interpret the mechanisms fulfilling nutritional demands and … hints of potential assistance from co-habitant microorganisms were unmasked. Plant polysaccharides such as …
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